š¬ Plate Count vs. Pathogen Testing:
- Stailee Seubert

- Oct 16
- 2 min read
In microbial Quality Control, businesses often confuse the two foundational tests for safety and quality: the Microbial Plate Count (Enumeration) and Absence/Presence Pathogen Testing (Detection).
Understanding which test to use, and when, is critical for protecting your brand and consumers.
1ļøā£ Microbial Plate Counts
What it Measures: The total numberĀ of viable, culturable bacteria and/or fungi (like yeasts and molds) in a sample (often called APC or TVC).
Key Insight (Quantification): Results are reported as Colony Forming Units (CFU)/g or mL (e.g., 103 CFU/g).
The Primary Goal: To assess the overall sanitary quality of a product. High counts indicate issues like poor sanitation, process control failures, or a short shelf life.
Safety Limitation: It does not identify specific pathogens. A low count is an indicator of cleanliness, but it is notĀ a guarantee of safety.
2ļøā£ Absence/Presence Pathogen Testing
What it Measures: The presence or absence of a specific, highly dangerous pathogen (e.g., E. coli O157:H7, Salmonella, Listeria).
Key Insight (Detection): Results are reported as Detected or Not Detected (Absent) in a specific sample size.
The Primary Goal (Risk Mitigation): To confirm product safety and compliance with regulatory mandates (like FSMA) which require zero tolerance for certain organisms.
Because pathogens are typically present in low concentrations and not homogenous throughout a product, samples must be enriched overnight to ensure the target pathogen(s) can grow to detectable levels.Ā The enriched cultures are then plated on selective agars and incubated overnight, or run directly on DNA based systems such as qPCR.Ā
Because samples are enriched overnight, there is no way to know the original starting concentration, and thus are reported as present or absent in a specific quantity of product. (Ex. Absent/25g)
The Takeaway for QC Managers
You need BOTH to run a successful, compliant QC program:
Use Plate Counts to track hygiene, monitor your Critical Control Points (CCPs), and accurately predict product shelf life.
Use Absence/Presence Tests to verify the safety of raw materials and final products against critical regulatory standards.
Don't guess with your quality or your compliance. Partner with an ISO-accredited lab that provides both the broad quantitative data and the specific pathogen certainty you need.




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